Conformal Prediction: Ensuring Reliable Context Retrieval

Fateh Ali Aamir
4 min readDec 6, 2024

Photo by Naser Tamimi on Unsplash

As AI systems grow more advanced, ensuring their predictions are accurate and trustworthy becomes critical, especially in high-stakes domains like healthcare, finance, and legal assistance. Conformal Prediction is an uncertainty quantification method that complements retrieval techniques like Pinecone’s Similarity Search, enabling systems to filter results with measurable confidence levels. This article explains Conformal Prediction, contrasts it with similarity search, and illustrates its practical application with Python code.

What is Conformal Prediction?

Conformal Prediction is a statistical framework that provides confidence intervals or regions for predictions, ensuring they are accurate within a user-specified confidence level (e.g., 90%). Unlike traditional machine learning models, which give deterministic predictions or probabilities, Conformal Prediction adds an uncertainty quantification layer by calibrating with historical data.

Key Features:

  1. Calibration-Based: It relies on historical or validation data to compute prediction intervals.
  2. Model-Agnostic: This can be applied to any ML or AI model.
  3. Confidence-Controlled: Allows users to adjust the confidence level (e.g., 90%, 95%).

Conformal Prediction can help filter retrieved documents to ensure they meet a reliability threshold in the context of information retrieval.

What is Pinecone’s Similarity Search?

Pinecone is a vector database designed for efficient similarity search. It retrieves the most relevant data points (e.g., documents, contexts) by comparing query embeddings with indexed embeddings based on cosine similarity or other distance metrics.

How It Works:

  1. Indexing: Embedding vectors are stored in Pinecone’s index.
  2. Querying: When a query is submitted, it’s embedded and compared to stored vectors.
  3. Ranking: Results are ranked by similarity scores.

While similarity search efficiently retrieves relevant results, it doesn’t quantify the certainty or reliability of those results. That’s where Conformal Prediction steps in.

Difference Between Similarity Search and Conformal Prediction

Combining both allows for robust AI systems that retrieve relevant information and ensure its reliability.

Why Use Conformal Prediction?

  1. Uncertainty Quantification: Adds a layer of trust to predictions.
  2. High-Stakes Applications: Ideal for domains where errors can be costly.
  3. Enhanced Decision-Making: Ensures only high-confidence data informs the final output.
  4. Transparency: Indicates when the system cannot provide reliable answers.

Code Examples: Integrating Pinecone and Conformal Prediction

Below, we demonstrate how to combine Pinecone similarity search with Conformal Prediction to ensure high-confidence results.

1. Setting Up Pinecone

import pinecone
from langchain.embeddings import OpenAIEmbeddings

2. Calibrating Conformal Prediction

Use historical similarity scores to determine a confidence threshold.

import numpy as np

# Example calibration scores from past queries
calibration_scores = [0.95, 0.87, 0.78, 0.92, 0.81, 0.85, 0.89]
# Define confidence level (e.g., 90%)
confidence_level = 0.9
# Calculate the threshold for the given confidence level
confidence_threshold = np.quantile(calibration_scores, 1 - confidence_level)
print(f"Calibrated confidence threshold: {confidence_threshold:.2f}")

# Initialize Pinecone
pinecone.init(api_key="your-pinecone-api-key", environment="us-west1-gcp")
index_name = "index_1"
index = pinecone.Index(index_name)
# Embed a query
embedding_model = OpenAIEmbeddings(model="text-embedding-ada-002")
query = "What are the symptoms of a heart attack?"
query_vector = embedding_model.embed_query(query)
# Perform similarity search
results = index.query(vector=query_vector, top_k=5, include_metadata=True)
print("Results from similarity search:")
for match in results["matches"]:
print(f"Score: {match['score']:.2f}, Context: {match['metadata']['context']}")

3. Filtering Results with Conformal Prediction

Filter results based on the calibrated confidence threshold.

# Apply the conformal prediction threshold
reliable_results = [
match for match in results["matches"] if match["score"] >= confidence_threshold
]

# Display reliable results
if reliable_results:
print("Reliable results:")
for match in reliable_results:
print(f"Score: {match['score']:.2f}, Context: {match['metadata']['context']}")
else:
print("No reliable context found. Please refine your query.")

Query-Based Example: End-to-End Workflow

Here’s a complete example that integrates similarity search, conformal prediction, and a language model for answering queries.

from langchain.chains.question_answering import load_qa_chain

# Define the QA chain
qa_chain = load_qa_chain(llm="your-llm")
# Filter results with conformal prediction
if reliable_results:
contexts = " ".join([match["metadata"]["context"] for match in reliable_results])
response = qa_chain.run({"context": contexts, "question": query})
print(f"Answer: {response}")
else:
print("No reliable results found to generate an answer.")

Advantages of This Approach

  1. Relevance with Similarity Search: Pinecone ensures relevant contexts are retrieved.
  2. Reliability with Conformal Prediction: Filters contexts to guarantee reliability.
  3. Seamless Integration: Works well in pipelines for QA systems or recommender engines.

Conclusion

While similarity search ensures relevant results, it may retrieve contexts that aren’t reliable enough for decision-making. Conformal Prediction enhances these systems by quantifying uncertainty and filtering results based on confidence thresholds. This dual approach is particularly valuable in domains requiring high precision and reliability, such as medical triage or legal analysis.

By implementing the techniques and examples outlined here, developers can build robust, trustworthy AI systems that go beyond relevance to deliver actionable, reliable insights.

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Fateh Ali Aamir
Fateh Ali Aamir

Written by Fateh Ali Aamir

23. A programmer by profession. A writer by passion.

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